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Advancing spatial biology at the Cambridge Stem Cell Institute

We provide end-to-end support for spatial transcriptomics and imaging projects – from experimental design and histology through to genomics, data analysis, and publication.


About the Platform

The DRP Spatial Platform (DSF) is a specialist unit within the Cambridge Stem Cell Institute (CSCI), University of Cambridge. Our mission is to be the leading spatial biology core facility in Cambridge – and among the best in the UK.

We bring together expertise in histology, imaging, genomics, and computational analysis to support researchers across CSCI and beyond. Whether you need a full collaborative partnership or a focused service run, our team can help at every stage of your spatial project.

 


What We Do

  • Project Design & Planning – Collaborative experimental design tailored to your research questions
  • Histology & Sample Preparation – H&E staining, and sample processing
  • Imaging – Slide scanning, CytAssist/Xenium preparation
  • Genomics – Visium HD, CytAssist/Xenium spatial transcriptomics
  • Data & Analysis – Quality control, data storage, and computational analysis support

 


Workflow

Every spatial project at the DRP Spatial Platform follows a structured pipeline to ensure quality and reproducibility:

  1. Project Design & Planning – We discuss your research goals, sample types, and experimental design.
  2. Histology & Sample Preparation – Tissue microarrays, H&E, and other preparations handled by our histology team.
  3. Imaging – Slide scanning, CytAssist/Xenium, and laser capture microdissection.
  4. Genomics – Spatial transcriptomics runs on Visium HD, CytAssist, or Xenium.
  5. Data QC, Storage & Analysis – Quality control, secure data storage, and computational analysis support.

 


Services

Engagement Tiers

The DRP Spatial Platform supports spatial biology projects at three levels of engagement, from fully collaborative research partnerships to standalone service runs.

Engagement Level Planning Wetlab Support Analysis Support Service
Full collaboration Joint X X X
Partial collaboration Joint Partial Partial X
Service only --- --- --- X

Full Collaboration
For research groups seeking deep partnership. We work with you from the initial project design through to publication, providing wetlab support, analysis, and ongoing consultation. Ideal for groups integrating spatial data as a central component of their research.

Partial Collaboration
For groups that have some in-house capability but need specialist support at specific stages. We provide targeted assistance with planning, wetlab protocols, or analysis as needed.

Service Only
For established groups who simply need access to our instruments and core facilities. We run the spatial assays and deliver data, while your team handles the rest.

Contact

Interested in working with the DRP Spatial Platform? We’d love to hear about your project. Email us to tell us about your research, and a member of our team will be in touch to discuss how we can help.

Email: spatial-DRP@stemcells.cam.ac.uk 

Technologies & Platforms

10x Genomics Visium HD

10x Genomics Xenium

CytAssist

Laser Capture Microdissection

Slide Scanning & Imaging

Akoya Phenocycler

Miltenyi MACsima

Get Started

Step 1: Submit an enquiry – Email the team: spatial-DRP@stemcells.cam.ac.uk 

Step 2: Consultation – We’ll review your submission and schedule a consultation meeting to discuss your project in detail.

Step 3: Sample preparation – We’ll provide guidance on sample requirements, including H&E staining and RNA quality control.

Step 4: Processing – Once samples are ready, we coordinate scheduling and run the spatial experiment.

Step 5: Data delivery – We deliver processed data along with QC reports, and can provide analysis support as agreed.